Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000727168 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 35929318 |
Total Bases | 1.7 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGTAATCTCGTA | 842823 | 2.345780679722337 | TruSeq Adapter, Index 22 (97% over 40bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGTAATCTCGTAT | 226673 | 0.6308858965817274 | TruSeq Adapter, Index 22 (97% over 40bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGTACGTAATATCGTA | 38056 | 0.10591907143909607 | TruSeq Adapter, Index 22 (97% over 40bp) |