Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000727628 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16379787 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATG | 552413 | 3.3725285927100273 | TruSeq Adapter, Index 12 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGC | 321294 | 1.9615273385423144 | TruSeq Adapter, Index 12 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATATCGTATG | 37102 | 0.22651088197911243 | TruSeq Adapter, Index 12 (97% over 49bp) |
CGGTGGTCGCCGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTG | 22363 | 0.13652802689070376 | TruSeq Adapter, Index 12 (100% over 37bp) |