Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000727641 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21424102 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 1238601 | 5.781343834154636 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 128851 | 0.6014301089492573 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGAGTAGATCTCGGTGGTCGCC | 26093 | 0.12179273605026712 | Illumina Single End PCR Primer 1 (98% over 50bp) |
CAAGCAGAAGACGGCATACGAGATTCTGACATGTGACTGGAGTTCAGACG | 23543 | 0.10989025350980873 | RNA PCR Primer, Index 40 (96% over 29bp) |