Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000727673 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29246548 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 1732639 | 5.924251299674752 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 169177 | 0.5784511731093871 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGGGTAGATCTCGGTGGTCGCCG | 42464 | 0.14519320365603489 | Illumina Single End PCR Primer 1 (98% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGAGTAGATCTCGGTGGTCGCC | 31921 | 0.10914450484891414 | Illumina Single End PCR Primer 1 (98% over 50bp) |