Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000727701 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28140363 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 2294087 | 8.152300665062494 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG | 62349 | 0.22156430604679833 | Illumina Single End PCR Primer 1 (100% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGGGTAGATCTCGGTGGTCGCC | 35573 | 0.12641272609027823 | Illumina Single End PCR Primer 1 (98% over 50bp) |
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGAGTAGATCTCGGTGGTCGCC | 29159 | 0.10361984314132694 | Illumina Single End PCR Primer 1 (98% over 50bp) |