Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000727794 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22872385 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATCTCGTA | 359631 | 1.5723371218174231 | TruSeq Adapter, Index 19 (97% over 40bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATCTCGTAT | 186347 | 0.8147248308385855 | TruSeq Adapter, Index 19 (97% over 40bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATATCGTA | 50486 | 0.2207290582070912 | TruSeq Adapter, Index 19 (97% over 40bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATATCGTAT | 24443 | 0.10686686150132571 | TruSeq Adapter, Index 19 (97% over 40bp) |