Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000728374 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 23293472 |
Total Bases | 1.1 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTA | 1905234 | 8.179261554481872 | TruSeq Adapter, Index 16 (97% over 40bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTAT | 426748 | 1.8320497691370354 | TruSeq Adapter, Index 16 (97% over 40bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATATCGTA | 114381 | 0.49104315578201485 | TruSeq Adapter, Index 16 (97% over 40bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATATCGTAT | 24395 | 0.10472891289027243 | TruSeq Adapter, Index 16 (97% over 40bp) |