Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000728748 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14792943 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGC | 687742 | 4.649122219966642 | TruSeq Adapter, Index 9 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATG | 274081 | 1.852782100221707 | TruSeq Adapter, Index 9 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATATCGTATGC | 47114 | 0.3184897014745477 | TruSeq Adapter, Index 9 (98% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATATCGTATG | 20286 | 0.13713295589660557 | TruSeq Adapter, Index 9 (97% over 49bp) |