Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000729778 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 21227867 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 503347 | 2.371161454893231 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 385183 | 1.8145157966177197 | TruSeq Adapter, Index 1 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 53646 | 0.25271498073734866 | TruSeq Adapter, Index 1 (98% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 44283 | 0.20860786436998122 | TruSeq Adapter, Index 1 (97% over 49bp) |