Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000729858 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16886698 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 600174 | 3.554122896021472 | TruSeq Adapter, Index 1 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 250852 | 1.4855005993474864 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 56415 | 0.3340795222369702 | TruSeq Adapter, Index 1 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 20820 | 0.12329230972212565 | TruSeq Adapter, Index 1 (98% over 50bp) |