Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000729910 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18704358 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGC | 2604546 | 13.924808325418065 | TruSeq Adapter, Index 3 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATG | 642914 | 3.4372417379949636 | TruSeq Adapter, Index 3 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATATCGTATGC | 52317 | 0.27970486877977846 | TruSeq Adapter, Index 3 (98% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATATCGTATG | 21436 | 0.11460430772336586 | TruSeq Adapter, Index 3 (97% over 49bp) |