Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000730060 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 27565182 |
Total Bases | 1.3 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTA | 2039979 | 7.400564233531997 | TruSeq Adapter, Index 18 (97% over 40bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTAT | 517681 | 1.878024966423222 | TruSeq Adapter, Index 18 (97% over 40bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATATCGTA | 43351 | 0.15726723661755618 | TruSeq Adapter, Index 18 (97% over 40bp) |