Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000730405 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20742845 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 631718 | 3.0454742346095727 | TruSeq Adapter, Index 1 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 273696 | 1.3194718467982574 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 74642 | 0.359844563269889 | TruSeq Adapter, Index 1 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 32687 | 0.1575820481713092 | TruSeq Adapter, Index 1 (98% over 50bp) |