Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000730727 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 19294696 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATG | 561388 | 2.909545711422455 | TruSeq Adapter, Index 1 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC | 248398 | 1.287390068234296 | TruSeq Adapter, Index 1 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATG | 68253 | 0.3537397013148069 | TruSeq Adapter, Index 1 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC | 28910 | 0.14983392327093414 | TruSeq Adapter, Index 1 (98% over 50bp) |