Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000730809 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18824078 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATG | 784469 | 4.167370109707366 | TruSeq Adapter, Index 9 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGC | 483244 | 2.567158933361836 | TruSeq Adapter, Index 9 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATATCGTATG | 47203 | 0.2507586294531929 | TruSeq Adapter, Index 9 (97% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATATCGTATGC | 27025 | 0.14356612844464414 | TruSeq Adapter, Index 9 (98% over 50bp) |