FastQCFastQC Report
Fri 10 Feb 2023
EGAF00000768213

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000768213
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95231858
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG1282350.13465556872785156No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1119010.11750374543779248No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)