FastQCFastQC Report
Fri 6 Jan 2023
EGAF00000771654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000771654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74829056
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT796110.10639049088097544No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC782030.10450886885436587No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)