Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00000771760 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 38385575 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC | 2888226 | 7.524248366736723 | TruSeq Adapter, Index 5 (100% over 50bp) |
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATG | 145328 | 0.3786005550262045 | TruSeq Adapter, Index 5 (100% over 49bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATATCGTATGC | 71178 | 0.1854290316088791 | TruSeq Adapter, Index 5 (98% over 50bp) |
GATTGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC | 70328 | 0.18321465811050117 | TruSeq Adapter, Index 5 (98% over 50bp) |