FastQCFastQC Report
Tue 20 Dec 2022
EGAF00000771899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000771899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176368992
Sequences flagged as poor quality0
Sequence length100
%GC20

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGC9561420.5421259083909715TruSeq Adapter, Index 7 (100% over 50bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)