FastQCFastQC Report
Mon 6 Mar 2023
EGAF00000772800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000772800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57807349
Sequences flagged as poor quality0
Sequence length100
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG627980.10863324661367882No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG622200.10763337374284368No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG620700.1073738911639072No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)