FastQCFastQC Report
Wed 22 Feb 2023
EGAF00000772870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000772870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68389894
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTC952630.13929397229362572No Hit
CTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGCGTT925440.13531823868596726No Hit
GGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCT703020.10279588969680227No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)