FastQCFastQC Report
Wed 29 Mar 2023
EGAF00000773120

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000773120
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42415864
Sequences flagged as poor quality0
Sequence length100
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTA11184962.636975637228561TruSeq Adapter, Index 14 (97% over 44bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTTCCGTATCTCGTAT9508382.2417037172695573TruSeq Adapter, Index 14 (97% over 44bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)