FastQCFastQC Report
Sun 5 Mar 2023
EGAF00000773159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000773159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56898604
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG801710.14090152369994877No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG764130.13429679223764435No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG638990.11230328251990154No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)