FastQCFastQC Report
Sat 17 Dec 2022
EGAF00000773668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000773668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences252943948
Sequences flagged as poor quality0
Sequence length125
%GC20

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGGCCAATATCTCGTA3561870.14081657332240266Illumina Paired End PCR Primer 2 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)