FastQCFastQC Report
Mon 23 Jan 2023
EGAF00000776253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000776253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences175893619
Sequences flagged as poor quality0
Sequence length98
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA13867850.7884225748973872No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACA9572870.5442420284729033No Hit
CAAACGTAATAACGAACGCCTATAATCCCAACTACTTAAAAAACTAAAAC5339600.30356985263916825No Hit
CAAACGCGATAACTCACGCCTATAATCCCAACACTTTAAAAAACCGAAAC4621220.262728120910401No Hit
CAAACGTAATAACGAACGCCTATAATCCCAACTACTCGAAAAACTAAAAC4123050.2344058882545364No Hit
CAAATTCACACCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA2919850.1660009053540481No Hit
CAAACGCGATAACGAACGCCTATAATCCCAACTACTCGAAAAACTAAAAC2742650.15592663426863712No Hit
CAAATTCACGCCATTCTCCTACCTCAACCTCCTAAATAACTAAAACTACA2499840.1421222676645251No Hit
CAAAATAATCTCGATCTCCTAACCTCGTAATCCGCCCGCCTCGACCTCCC2394520.13613455755890724No Hit
CAAATTCACACCATTCTCCTACCTCAACCTCCCAAATAACTAAAACTACA2389280.1358366502198127No Hit
CAAATTCATACCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA1967840.1118767133900406No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)