FastQCFastQC Report
Mon 23 Jan 2023
EGAF00000776280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000776280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149970118
Sequences flagged as poor quality0
Sequence length98
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA6917260.4612425523329921No Hit
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTTAAGTAGTTGGGATTATA4399470.2933564405143697No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC3560100.237387290713474No Hit
CGGGATGGTTTCGATTTTTTGATTTCGTGATTCGTTCGTTTCGGTTTTTT2613590.1742740510479561No Hit
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTTGAGTAGTTGGGATTATA2304300.1536506092500374No Hit
CGGGCGCGGTGGCGGGCGTTTGTAGTTTTAGTTATTCGGGAGGTTGAGGT1826160.12176825786054259No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)