FastQCFastQC Report
Fri 10 Feb 2023
EGAF00000776283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000776283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121754060
Sequences flagged as poor quality0
Sequence length98
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NANATAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC4542710.37310542252143375No Hit
NANATAATTCCATTCCATTACATTCCGTTCCATTACATTCCCCTACACTC3166940.2601096012732553No Hit
NANATTCACGCCATTCTCCTACCTCAACCTCCCGAATAACTAAAACTACA1743550.14320261681622773No Hit
NANAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCCCTACACTC1715880.14093000266274489No Hit
NANATAATTCCATTCCATTACATTCCATTCCATTACATTCCCCTACACTC1300210.10678986803396946No Hit
NANAAAATTCCATTCCATTACATTCCATTCCATTCCATTCCATTCCATTC1262340.10367949947623924No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)