FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99965
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC4549945.51493022557895No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGATAGTGGCACC2938629.396288701045364No Hit
TCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACCA3820.382133746811384No Hit
CCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACCA3430.3431200920322113No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGCGCTGTGGTAGTGGCACC2960.2961036362726955No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGCAGGAGCTGTGGTAGTGGCACC2610.2610913819836943No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGACGGAGCTGTGGTAGTGGCACC2450.24508578002300804No Hit
CCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGATAGTGGCACCA2300.2300805281848647No Hit
TCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGATAGTGGCACCA2290.22908017806232184No Hit
TCCTCAGGATTGCATTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC2200.2200770269594358No Hit
TCCTCAGGCTTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC2030.20307107487620668No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGCGCTGTGATAGTGGCACC1920.19206722352823488No Hit
TCCTCCGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1900.1900665232831491No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGCGGCACC1900.1900665232831491No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGCAGGAGCTGTGATAGTGGCACC1870.18706547291552045No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTCGTGGCACC1860.18606512279297754No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGCGGTAGTGGCACC1790.1790626719351773No Hit
TCCTCAGGATTGCATTTACCACTCAGAGAAGGAGCTGTGATAGTGGCACC1520.15205321862651927No Hit
TCCTCAGGATTGCCTTTACCACTCAGCGAAGGAGCTGTGGTAGTGGCACC1500.1500525183814335No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGACGGAGCTGTGATAGTGGCACC1480.14805181813634774No Hit
GCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1430.14305006752363328No Hit
TCCTCAGTATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1360.13604761666583304No Hit
TCCTCGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACCA1330.13304656629820438No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCAAC1320.13204621617566148No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGTGCTGTGGTAGTGGCACC1310.1310458660531186No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGATCGTGGCACC1300.1300455159305757No Hit
TCCCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACCA1300.1300455159305757No Hit
TCCTCAGGAATGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1300.1300455159305757No Hit
TCCTCAGGATTGCCTTTCCCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1290.1290451658080328No Hit
TCCTCAGGATTGCCTTTACAACTCAGAGAAGGAGCTGTGGTAGTGGCACC1280.12804481568548992No Hit
TCATCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1270.12704446556294705No Hit
TCCGCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1240.12404341519531836No Hit
TCCTCCGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGATAGTGGCACC1240.12404341519531836No Hit
TCCTCAGGATTGACTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1240.12404341519531836No Hit
TCTTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1230.12304306507277547No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGATAGCGGCACC1220.12204271495023257No Hit
TCCTTAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1210.1210423648276897No Hit
TCCTCAGGATTGCCTTTACCACTCAGCGAAGGAGCTGTGATAGTGGCACC1170.11704096433751814No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCCCC1150.11504026409243236No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGAGGTAGTGGCACC1140.11403991396988947No Hit
TCCTCAGGCTTGCCTTTACCACTCAGAGAAGGAGCTGTGATAGTGGCACC1120.11203921372480367No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGCTAGTGGCACC1110.1110388636022608No Hit
TCCTAAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACC1090.109038163357175No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGACACC1080.10803781323463213No Hit
TCCTCAGATTGCCTTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACCA1070.10703746311208923No Hit
TCCTCAGGATTGCCTTACCACTCAGAGAAGGAGCTGTGGTAGTGGCACCA1010.1010353623768319No Hit
TCCTCAGGATTGCCTTTACCACTCAGAGAAGGAGCTGCGATAGTGGCACC1000.100035012254289No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)