FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782633

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782633
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88646
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT9151.0321954741330686No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT6840.7716084200076709No Hit
GTCTCAGCAAACTGCACAGCTTGGACTTACTCGGTAGTACTCCACTGCAT2640.29781377614331156No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2190.24705006430070167No Hit
AGTCAGGTCACGGTCAAACCAGGTGCTCCAGATCCCACCACCATAGGTCT2010.22674457956365768No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1930.21771991968052704No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC1660.18726169257496109No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1400.15793154795478645No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA1310.14777880558626447No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)