FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782635

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782635
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145874
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT14701.0077189903615449No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT10750.7369373568970481No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA3310.22690815361202132No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2850.1953740899680546No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2220.15218613323827412No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1780.12202311583969726No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)