FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences202488
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT18900.933388645253052No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT10620.5244755244755245No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCGGGGGATGGGGGTC10490.5180553909367469No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA8710.4301489470980997No Hit
ACACAGGGAGGGGAACACCACACACCGGGGCCTGTCACGGGGTGGGGGCC6410.316561969104342No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC3990.19704871399786653No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC3770.1861838726245506No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGTGGGGGGCTA2250.11111769586345857No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)