FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences229336
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT21950.957110963826002No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA13450.5864757386542017No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCGGGGGATGGGGGTC12720.5546447134335647No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT11200.48836641434401923No Hit
ACACAGGGAGGGGAACACCACACACCGGGGCCTGTCACGGGGTGGGGGCC7290.3178742107649911No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC4520.19709073150312206No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC4480.1953465657376077No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGTGGGGGGCTA2430.10595807025499702No Hit
ACACAGGGAGGGGAACATCTCACATTGGGGCCTGTTTGGGGGTGACGGAC2400.10464994593086126No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)