FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences215262
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT16370.7604686382176139No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA12360.5741840176157427No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT9420.4376062658527748No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC4430.2057957279965809No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC4170.19371742341890347No Hit
ACACAGGGAGGGGAACAACACACACCAGGGCCTGTTGGGGGTCGGGGATA3330.15469520862948408No Hit
ACACAGGGAGGGGAACAACACACACCAGGGCCTGTTGGGAGGTGGAGGGA2750.1277512984177421No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)