FastQCFastQC Report
Sun 11 Sep 2022
EGAF00000782648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1887646
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT156940.8314058886041132No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT101290.5365942554907012No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC44280.23457788165789561No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC36680.19431609528481505No Hit
ACACAGGGAGGGGAACATCACACACCGGGGCCTGTCAGGGGGTGGGGGGC20640.10934253562373453No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)