FastQCFastQC Report
Sat 3 Sep 2022
EGAF00000782656

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782656
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510296
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC13380.26220076191073416No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC13280.26024111496072866No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA8800.17244893160048286No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT7700.1508928151504225No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT7220.14148650979039615No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCGGGGGGTGGGGGGC6030.11816671108533087No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTTGGGGGGTGGGGGGC5860.11483531127032154No Hit
ACACAGGGAGGGGAACATCACACACCGGGGCCTGTCAGGGGGTGGGGGGC5340.10464514713029302No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)