FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142734
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT12120.849131951742402No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT5440.38112853279526954No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4540.318074179943111No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA4340.3040621015315202No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA3200.2241932545854527No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2330.16324071349503272No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2260.15833648605097594No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)