FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158665
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT14100.888664796899127No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT12220.7701761573125768No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA7720.4865597327703022No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA5900.37185264551098224No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN5220.32899505246903854No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2780.1752119244950052No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2160.13613588378029182No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)