FastQCFastQC Report
Sat 3 Sep 2022
EGAF00000782665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449769
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC13920.3094922059990795No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC12160.2703610075394258No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCGGGGGGTGGGGGGC5930.13184545844644696No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTTGGGGGGTGGGGGGC5340.11872761350826759No Hit
ACACAGGGAGGGGAACATCACACACCGGGGCCTGTCAGGGGGTGGGGGGC5090.11316920463615768No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCGGGGGGTGGGGGGC5020.1116128501519669No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTTGGGGGGTGGGGGGC4770.106054441279857No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)