FastQCFastQC Report
Sun 4 Sep 2022
EGAF00000782666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1273905
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC36540.28683457557667175No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC33890.26603239645028476No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCGGGGGGTGGGGGGC17170.13478242098115636No Hit
ACACAGGGAGGGGAACATCACACACCGGGGCCTGTCAGGGGGTGGGGGGC14970.11751268736679737No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTTGGGGGGTGGGGGGC14620.11476522974633116No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTTGGGGGGTGGGGGGC14600.1146082321680188No Hit
ACACAGGGAGGGGAACATCACACACCAGGGACTGTCAGGGGTGGGAGGAA13960.10958430966202345No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCGGGGGGTGGGGGGC13540.10628736051746401No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)