FastQCFastQC Report
Sat 3 Sep 2022
EGAF00000782668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507936
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC14070.277003402003402No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC11860.2334939834939835No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA11470.22581585081585082No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT9730.19155956655956655No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT7320.14411264411264413No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTTGGGGGGTGGGGGGC6090.11989699489699489No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCGGGGGGTGGGGGGC5700.11221886221886221No Hit
ACACAGGGAGGGGAACATCACACACCGGGGCCTGTCAGGGGGTGGGGGGC5200.10237510237510238No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)