FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782671

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782671
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences367166
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN17370.4730830196695773No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC10040.2734457983582358No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC8950.243758953715758No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT5350.14571065948372125No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTTGGGGGGTGGGGGGC5090.13862939378918526No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA5010.13645054280625113No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT4150.11302789473970902No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCGGGGGGTGGGGGGC4080.11112140012964164No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCGGGGGGTGGGGGGC4050.11030433101104133No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTTGGGGGGTGGGGGGC3680.10022714521497088No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)