FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782675

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782675
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141438
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT14951.0570002403880145No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT5840.4129017661448833No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA4660.3294729846293075No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA3220.2276615902374185No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2850.20150171806728034No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC2130.15059602087133583No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1970.1392836437166815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)