FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406657
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT32310.7945270830208259No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT23070.567308567170859No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA18370.4517320493683866No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8560.21049680689131134No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC7230.17779111142805853No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC6790.16697118210186962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)