FastQCFastQC Report
Sat 3 Sep 2022
EGAF00000782685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527399
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT36510.6922652488912568No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA13370.253508254661082No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC9990.18942015438026996No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT9620.18240459310692664No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC9390.1780435685316051No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8900.1687526900885288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)