FastQCFastQC Report
Fri 2 Sep 2022
EGAF00000782686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158079
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT13230.8369233104966505No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT10260.649042567323933No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA5350.33843837574883445No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA3710.2346927801921824No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC3030.19167631374186325No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2890.18281998241385636No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC2830.17902441184471055No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)