FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10697
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT1271.1872487613349536No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA1071.0002804524633075No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN930.8694026362531551No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT850.7946153127044966No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA480.448723941291951No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC170.1589230625408993No Hit
ACACAGGGAGGGGAACATCACACACCGGGGCCTGTTGTGGGGTGGGGGGA140.13087781621015238No Hit
ACCAGCAAGAGGCTTAGACCCAGCTTTCTTGTACAAAGTGGTCCCCGTGA120.11218098532298774No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC110.10283256987940544No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)