FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32540
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT4051.2446220036877689No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA3781.1616472034419176No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3140.9649661954517518No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT1700.5224339274738783No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1570.4824830977258759No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC460.14136447449293177No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC430.13214505224339276No Hit
TCCACAAAATGGATCCAGACAACTGTTCAAACTGATGGGACCCACTCCAT360.11063306699446834No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)