FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69850
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT6890.9863994273443092No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT5600.8017179670722978No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA4820.690050107372942No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA4760.6814602720114531No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN2480.3550465282748747No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1100.15748031496062992No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC810.1159627773801002No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTTGTGGGGTGGGGGGA770.11023622047244094No Hit
ACACAGGGAGGGGAACATCACACACCGGGGCCTGTTGTGGGGTGGGGGGA760.10880458124552612No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTCGGGGGA710.10164638511095203No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)