FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38338
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT3911.0198758412019406No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA1810.47211643799885233No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA1680.43820752256247064No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT1150.2999634827064531No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN880.2295372737231989No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC760.19823673639730813No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC560.1460691741874902No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTTGTGGGGTGGGGGGA400.10433512441963587No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)