FastQCFastQC Report
Thu 1 Sep 2022
EGAF00000782701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00000782701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77879
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAGGGAGGGGAACAACACACACTGGGGCCTTTCGGGAGGCAGAGCGT9251.1877399555721055No Hit
ACACAGGGAGGGGAACAACACACACTGGGGCCTTCCGGGAGACAGAGCGT6320.811515299374671No Hit
ACACAGGGAGGGGAACATCACACTCTGGGGACTGTTGTGGGGTGGGGGGA4310.5534226171368405No Hit
ACACAGGGAGGGGAACATCACACACCAGGGCCTGTCAGGGGGTGGGGGGC1390.1784820041346191No Hit
ACACAGGGAGGGGAACATCACACACTGGGGCCTGTCAGGGGGTGGGGGGC1250.16050539940163588No Hit
ACACAGGGAGGGGAACATTGCAAACCACCATGGCA910.11684793076439091No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)